TY - JOUR
T1 - Pulmonary nodule segmentation framework based on fine-tuned and pre-trained deep neural network using CT images
AU - Bhattacharjee, Ananya
AU - Murugan, R.
AU - Goel, Tripti
AU - Mirjalili, Seyedali
N1 - Publisher Copyright:
IEEE
PY - 2023
Y1 - 2023
N2 - Deep learning is one of the most rapidly growing and emerging technologies in pulmonary nodule segmentation. However, the different shape, size and location of the nodules make it extremely difficult to segment correctly. The purpose of this study is to obtain a fast and accurate segmentation algorithm with less number of stages. A fine-tuned dual skip connectionbased segmentation framework is proposed that integrates pretrained ResNet 152 with the U-Net architecture, namely, ResiUNet. Nine different pre-trained and fine-tuned encoder backbones such as ResNet18, ResNet 34, ResNet 50, ResNet 101, ResNet 152, SEResNet18, SE-ResNet34, ResNext 101, ResNext 50 are compared and the proposed ResiU-Net approach gives the best results. Also, the fine-tuned ResiU-Net performs better than nontuned ResiU-Net. 1224 computed tomography patient images with different nodule shapes and sizes are selected. The proposed method achieves 97.44% F score,95.02% intersection over union score, 94.87% dice score, 0.34% binary cross-entropy loss and 0.7585 combined dice coefficient and binary focal loss. The proposed ResiU-Net outperforms the state-of-the-art methods and reports the best evaluation metrics. The time taken by the model to train is 43 minutes. Hence, the proposed model is a fast and accurate segmentation approach.
AB - Deep learning is one of the most rapidly growing and emerging technologies in pulmonary nodule segmentation. However, the different shape, size and location of the nodules make it extremely difficult to segment correctly. The purpose of this study is to obtain a fast and accurate segmentation algorithm with less number of stages. A fine-tuned dual skip connectionbased segmentation framework is proposed that integrates pretrained ResNet 152 with the U-Net architecture, namely, ResiUNet. Nine different pre-trained and fine-tuned encoder backbones such as ResNet18, ResNet 34, ResNet 50, ResNet 101, ResNet 152, SEResNet18, SE-ResNet34, ResNext 101, ResNext 50 are compared and the proposed ResiU-Net approach gives the best results. Also, the fine-tuned ResiU-Net performs better than nontuned ResiU-Net. 1224 computed tomography patient images with different nodule shapes and sizes are selected. The proposed method achieves 97.44% F score,95.02% intersection over union score, 94.87% dice score, 0.34% binary cross-entropy loss and 0.7585 combined dice coefficient and binary focal loss. The proposed ResiU-Net outperforms the state-of-the-art methods and reports the best evaluation metrics. The time taken by the model to train is 43 minutes. Hence, the proposed model is a fast and accurate segmentation approach.
KW - Biomedical imaging
KW - Cancer
KW - Computed tomography
KW - Computer architecture
KW - Image segmentation
KW - Lung
KW - lung
KW - Lung cancer
KW - nodule
KW - pretrained
KW - ResNet
KW - segmentation
KW - U-Net
UR - http://www.scopus.com/inward/record.url?scp=85147272798&partnerID=8YFLogxK
U2 - 10.1109/TRPMS.2023.3236719
DO - 10.1109/TRPMS.2023.3236719
M3 - Article
AN - SCOPUS:85147272798
SN - 2469-7311
SP - 1
JO - IEEE Transactions on Radiation and Plasma Medical Sciences
JF - IEEE Transactions on Radiation and Plasma Medical Sciences
ER -